January 10, 2013

The genome of Paenibacillus alvei

Researchers from Georg-August University Göttingen Germany have completed the genomic sequence of P. alvei isolate DSM 29 (6.83Mb)  This is an aerobic, Gram-positive bacteria that is often associated with Melissococcus plutonius, the bacterial causative agent of European foul brood disease in honey bees.

Paenibacillus alvei are the larger, elongated bacteria.  Melissococcus plutonius bacteria are clustered in the center.  Photo from the USDA/ARS.
Along with P. alvei, a number of other bacteria also seem to associate frequently with M. plutonius infections including Brevibacillus laterosporus and Enterococcus faecalis.  Of note from the genome are a number of chitinase genes (10) and a hyaluronate lyase homolog, each of which may be virulence factors involved in host cell invasion.  Also, a unique antimicrobial gene and several encoded toxin molecules (binary, mosquitocidal, alveolysin, insecticidal toxin complex) were identified.  454 GS-FLX with Titanium XL was used to sequence paired-end and shotgun DNA libraries, assembled to 18x coverage in 25 contigs.  The genome contains approximately 6,605 coding genes.

A link to the paper in the Journal of Bacteriology is here:
P. alvei genome by Djukic, Becker, Poehlein, Voget, and Daniel

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